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|
Subfamily
|
CDS
|
CDS locus
|
Full-length Xkol sequence
|
Length
|
TIR left
|
TIR right
|
TSD left
|
TSD right
|
|---|
|
A1
|
Tr21
|
Chr04:107657217..107659511(+)
|
Chr04:107650836..107663091(+)
|
12,216
|
AGCGATTCTGACATGG
|
AGTGATACTGACAGTA
|
TTAA
|
TTAA
|
|
A1
|
Tr22
|
Chr01:168455606..168457900(−)
|
Chr01:168451382..168460584(−)
|
9163
|
AGCGATTCTGACATGG
|
AGTGATACTGACAGTA
|
TTAA
|
TTAA
|
|
A1
|
Tr23
|
Chr03:106168762..106171056(−)
|
Chr03:106165634..106173458(−)
|
7785
|
AGCGATTCTGACATGG
|
AGTGATACTGACAGTA
|
TTAA
|
TTAA
|
|
A2
|
Tr8
|
Chr08:54548260..54550611(+)
|
Chr08:54546557..54553359(+)
|
6763
|
AGGAGAAGGAAAGGCT
|
AGGAAATGGCAAGCCA
|
TTAA
|
TTAA
|
|
A2
|
Tr11
|
scaffold_609:18293..20635(−)
|
scaffold_609..15284:22344(−)
|
7021
|
AGGAGAAGGAAAGGCT
|
AGGAAATGGCAAGCCA
|
TTAA
|
ATAA
|
|
A3
|
Tr14
|
scaffold_51:231432..233759(−)
|
scaffold_51..227047:240993(−)
|
13,907
|
AGGACATGTCAACCCC
|
AGGACGTGTCAACCCT
|
TTAA
|
TTAA
|
|
A3
|
Tr15
|
Chr01:83498100..83500424(+)
|
Chr01:83495893..83504753(+)
|
8821
|
AGGACATGTCAACCCC
|
AGGACGTGTCAACCAT
|
TTAA
|
TTAA
|
|
A4
|
Tr25
|
Chr01:107512548..107514821(+)
|
Chr01:107510216..107521330(+)
|
11,075
|
AGGACAAGGAAAGCTT
|
AGGAAAATGAAAGTCA
|
TTAA
|
TTAA
|
|
A5
|
Tr2
|
Chr02:100830975..100833458(+)
|
Chr02:100828018..100838339(+)
|
10,282
|
AGGGGAACTATCATGA
|
AGGGGATCTATCATGA
|
TTAA
|
TTAA
|
|
A6
|
Tr9
|
Chr02:55486066..55488417(+)
|
Chr02:55483392..55492644(+)
|
9213
|
AGAGCAAGTAAAGTCG
|
AGAGCAAGGCAAGCTT
|
TTAA
|
TTAA
|
- The position of full-length transposases, their left and right terminal sequences, and conservation of target sequences duplicated by the insertion of a transposon
